STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmx3aThioredoxin-related transmembrane protein 3a. (437 aa)    
Predicted Functional Partners:
taar14h
Trace amine-associated receptor 14h; Belongs to the G-protein coupled receptor 1 family.
      
 0.830
abcg4b
ATP-binding cassette, sub-family G (WHITE), member 4b.
     
 0.744
fkbp9
Peptidylprolyl isomerase.
    
 
 0.721
guca1e
Guanylate cyclase activator 1e.
   
 
 0.703
sgpp1
Sphingosine-1-phosphate phosphatase 1.
    
 
 0.688
cdh19
Uncharacterized protein.
      
 0.649
dbpb
D site albumin promoter-binding protein b.
      
 0.619
emc6
ER membrane protein complex subunit 6; Belongs to the EMC6 family.
      
 0.573
opn7a
Opsin 7, group member a; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
      
 0.540
nmnat1
Nicotinamide-nucleotide adenylyltransferase.
   
  
 0.521
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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