STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnga1aCyclic nucleotide-gated channel subunit alpha 1a. (697 aa)    
Predicted Functional Partners:
cngb1a
Cyclic nucleotide-gated channel subunit beta 1a.
  
0.956
cnga1b
Cyclic nucleotide-gated channel subunit alpha 1b.
  
 
0.915
calm2a
Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
   
 
 0.904
calml4a
Calmodulin-like 4a.
     
 0.903
calml4b
Calmodulin-like 4b.
     
  0.900
LOC562466
Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 2.
  
0.806
cngb3.1
Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 1.
  
0.792
pde6ga
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
  
 0.671
pde6a
Phosphodiesterase.
   
 
 0.666
guca1b
Guanylate cyclase-activating protein 2.
   
  
 0.657
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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