Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC562466 | cnga1a | ENSDARP00000152721 | ENSDARP00000115254 | Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 2. | Cyclic nucleotide-gated channel subunit alpha 1a. | 0.806 |
LOC562466 | cnga1b | ENSDARP00000152721 | ENSDARP00000129576 | Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 2. | Cyclic nucleotide-gated channel subunit alpha 1b. | 0.789 |
LOC562466 | cngb1a | ENSDARP00000152721 | ENSDARP00000154080 | Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 2. | Cyclic nucleotide-gated channel subunit beta 1a. | 0.739 |
LOC562466 | cngb3.1 | ENSDARP00000152721 | ENSDARP00000140735 | Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 2. | Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 1. | 0.552 |
LOC562466 | pde6a | ENSDARP00000152721 | ENSDARP00000000392 | Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 2. | Phosphodiesterase. | 0.493 |
LOC562466 | pde6ga | ENSDARP00000152721 | ENSDARP00000134263 | Cyclic nucleotide-gated channel subunit beta 3, tandem duplicate 2. | Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a. | 0.724 |
calm2a | calml4a | ENSDARP00000010393 | ENSDARP00000098981 | Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. | Calmodulin-like 4a. | 0.907 |
calm2a | calml4b | ENSDARP00000010393 | ENSDARP00000128395 | Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. | Calmodulin-like 4b. | 0.904 |
calm2a | cnga1a | ENSDARP00000010393 | ENSDARP00000115254 | Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. | Cyclic nucleotide-gated channel subunit alpha 1a. | 0.904 |
calm2a | cnga1b | ENSDARP00000010393 | ENSDARP00000129576 | Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. | Cyclic nucleotide-gated channel subunit alpha 1b. | 0.913 |
calm2a | cngb1a | ENSDARP00000010393 | ENSDARP00000154080 | Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. | Cyclic nucleotide-gated channel subunit beta 1a. | 0.922 |
calml4a | calm2a | ENSDARP00000098981 | ENSDARP00000010393 | Calmodulin-like 4a. | Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. | 0.907 |
calml4a | calml4b | ENSDARP00000098981 | ENSDARP00000128395 | Calmodulin-like 4a. | Calmodulin-like 4b. | 0.902 |
calml4a | cnga1a | ENSDARP00000098981 | ENSDARP00000115254 | Calmodulin-like 4a. | Cyclic nucleotide-gated channel subunit alpha 1a. | 0.903 |
calml4a | cnga1b | ENSDARP00000098981 | ENSDARP00000129576 | Calmodulin-like 4a. | Cyclic nucleotide-gated channel subunit alpha 1b. | 0.903 |
calml4a | cngb1a | ENSDARP00000098981 | ENSDARP00000154080 | Calmodulin-like 4a. | Cyclic nucleotide-gated channel subunit beta 1a. | 0.920 |
calml4b | calm2a | ENSDARP00000128395 | ENSDARP00000010393 | Calmodulin-like 4b. | Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. | 0.904 |
calml4b | calml4a | ENSDARP00000128395 | ENSDARP00000098981 | Calmodulin-like 4b. | Calmodulin-like 4a. | 0.902 |
calml4b | cnga1a | ENSDARP00000128395 | ENSDARP00000115254 | Calmodulin-like 4b. | Cyclic nucleotide-gated channel subunit alpha 1a. | 0.900 |
calml4b | cnga1b | ENSDARP00000128395 | ENSDARP00000129576 | Calmodulin-like 4b. | Cyclic nucleotide-gated channel subunit alpha 1b. | 0.900 |
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