STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwc2Von Willebrand factor C domain-containing 2. (309 aa)    
Predicted Functional Partners:
ccdc36
Coiled-coil domain-containing 36.
      
 0.703
chrd
Chordin; Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes (By similarity); Belongs to the chordin family.
      
 0.683
metrn
Meteorin, glial cell differentiation regulator.
      
 0.681
nrn1a
Neuritin; Modulates postsynaptic dendritic arbor elaboration and synaptic maturation; Belongs to the neuritin family.
      
 0.663
chrdl2
Chordin-like protein.
      
 0.661
gsg1l
Germ cell-specific gene 1-like protein; As a component of the AMPAR complex, modifies AMPA receptor (AMPAR) gating.
      
 0.648
kbtbd12
Kelch repeat and BTB domain-containing protein 12.
      
 0.634
kcng3
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.629
klc4
Kinesin light chain 4.
      
 0.623
bmper
BMP-binding endothelial regulator.
      
 0.622
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.