Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lyl1 | fli1a | ENSDARP00000156332 | ENSDARP00000071331 | BHLH domain-containing protein. | Fli-1 proto-oncogene, ETS transcription factor a. | 0.681 |
Lyl1 | gata1a | ENSDARP00000156332 | ENSDARP00000002330 | BHLH domain-containing protein. | GATA-binding protein 1a. | 0.717 |
Lyl1 | gata2a | ENSDARP00000156332 | ENSDARP00000076860 | BHLH domain-containing protein. | GATA-binding protein 2a. | 0.852 |
Lyl1 | gfi1ab | ENSDARP00000156332 | ENSDARP00000065138 | BHLH domain-containing protein. | Growth factor-independent 1A transcription repressor b. | 0.756 |
Lyl1 | ldb1a | ENSDARP00000156332 | ENSDARP00000003158 | BHLH domain-containing protein. | LIM domain-binding protein 1-A; Binds to the LIM domain of a wide variety of LIM domain- containing transcription factors. | 0.730 |
Lyl1 | ldb1b | ENSDARP00000156332 | ENSDARP00000132230 | BHLH domain-containing protein. | LIM domain-binding protein 1-A. | 0.856 |
Lyl1 | lmo2 | ENSDARP00000156332 | ENSDARP00000115969 | BHLH domain-containing protein. | Rhombotin-2; Transcription factor that acts synergistically with tal1/scl in primitive and definitive hematopoiesis, and in endothelial development. Specifies mesodermal precursors to a hemangioblast cell fate. Hemangioblasts are bipotential precursors of blood and endothelium, and in the absence of hematopoietic induction cues such as gata1, tal1/scl-lmo2-induced haemangioblasts differentiate into endothelial cells. | 0.985 |
Lyl1 | runx1 | ENSDARP00000156332 | ENSDARP00000112019 | BHLH domain-containing protein. | Runt-related transcription factor. | 0.890 |
Lyl1 | tal1 | ENSDARP00000156332 | ENSDARP00000077498 | BHLH domain-containing protein. | T-cell acute lymphocytic leukemia protein 1 homolog; Transcription factor that plays a pivotal role in hemopoietic and endothelial development, acting synergistically with lmo2 and downstream of clo. Specifies mesodermal precursors to a hemangioblast cell fate. Hemangioblasts are bipotential precursors of blood and endothelium, and in the absence of hemopoietic induction cues such as gata1, tal1/scl-lmo2-induced hemangioblasts differentiate into endothelial cells. Isoform alpha and isoform beta are redundant for the initiation of primitive hemopoiesis but have distinct roles in the reg [...] | 0.488 |
Lyl1 | tcf3a | ENSDARP00000156332 | ENSDARP00000010044 | BHLH domain-containing protein. | Transcription factor 3a. | 0.756 |
fli1a | Lyl1 | ENSDARP00000071331 | ENSDARP00000156332 | Fli-1 proto-oncogene, ETS transcription factor a. | BHLH domain-containing protein. | 0.681 |
fli1a | gata1a | ENSDARP00000071331 | ENSDARP00000002330 | Fli-1 proto-oncogene, ETS transcription factor a. | GATA-binding protein 1a. | 0.961 |
fli1a | gata2a | ENSDARP00000071331 | ENSDARP00000076860 | Fli-1 proto-oncogene, ETS transcription factor a. | GATA-binding protein 2a. | 0.840 |
fli1a | lmo2 | ENSDARP00000071331 | ENSDARP00000115969 | Fli-1 proto-oncogene, ETS transcription factor a. | Rhombotin-2; Transcription factor that acts synergistically with tal1/scl in primitive and definitive hematopoiesis, and in endothelial development. Specifies mesodermal precursors to a hemangioblast cell fate. Hemangioblasts are bipotential precursors of blood and endothelium, and in the absence of hematopoietic induction cues such as gata1, tal1/scl-lmo2-induced haemangioblasts differentiate into endothelial cells. | 0.910 |
fli1a | runx1 | ENSDARP00000071331 | ENSDARP00000112019 | Fli-1 proto-oncogene, ETS transcription factor a. | Runt-related transcription factor. | 0.860 |
fli1a | tal1 | ENSDARP00000071331 | ENSDARP00000077498 | Fli-1 proto-oncogene, ETS transcription factor a. | T-cell acute lymphocytic leukemia protein 1 homolog; Transcription factor that plays a pivotal role in hemopoietic and endothelial development, acting synergistically with lmo2 and downstream of clo. Specifies mesodermal precursors to a hemangioblast cell fate. Hemangioblasts are bipotential precursors of blood and endothelium, and in the absence of hemopoietic induction cues such as gata1, tal1/scl-lmo2-induced hemangioblasts differentiate into endothelial cells. Isoform alpha and isoform beta are redundant for the initiation of primitive hemopoiesis but have distinct roles in the reg [...] | 0.758 |
gata1a | Lyl1 | ENSDARP00000002330 | ENSDARP00000156332 | GATA-binding protein 1a. | BHLH domain-containing protein. | 0.717 |
gata1a | fli1a | ENSDARP00000002330 | ENSDARP00000071331 | GATA-binding protein 1a. | Fli-1 proto-oncogene, ETS transcription factor a. | 0.961 |
gata1a | gata2a | ENSDARP00000002330 | ENSDARP00000076860 | GATA-binding protein 1a. | GATA-binding protein 2a. | 0.842 |
gata1a | gfi1ab | ENSDARP00000002330 | ENSDARP00000065138 | GATA-binding protein 1a. | Growth factor-independent 1A transcription repressor b. | 0.841 |
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