Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| chrna1 | chrna2a | ENSDARP00000021860 | ENSDARP00000028704 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Cholinergic receptor, nicotinic, alpha 2a (neuronal). | 0.862 |
| chrna1 | chrna4b | ENSDARP00000021860 | ENSDARP00000022694 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Neuronal nicotinic acetylcholine receptor alpha 4 subunit. | 0.867 |
| chrna1 | chrna7 | ENSDARP00000021860 | ENSDARP00000140114 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Cholinergic receptor, nicotinic, alpha 7 (neuronal). | 0.764 |
| chrna1 | chrnb1 | ENSDARP00000021860 | ENSDARP00000092302 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Cholinergic receptor, nicotinic, beta 1 (muscle). | 0.919 |
| chrna1 | chrne | ENSDARP00000021860 | ENSDARP00000116514 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Cholinergic receptor, nicotinic, epsilon. | 0.897 |
| chrna1 | colq | ENSDARP00000021860 | ENSDARP00000019894 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase. | 0.811 |
| chrna1 | dok7 | ENSDARP00000021860 | ENSDARP00000122990 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Docking protein 7. | 0.813 |
| chrna1 | gfpt1 | ENSDARP00000021860 | ENSDARP00000074585 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Glutamine--fructose-6-phosphate transaminase 1. | 0.617 |
| chrna1 | musk | ENSDARP00000021860 | ENSDARP00000139846 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Muscle, skeletal, receptor tyrosine kinase. | 0.708 |
| chrna1 | rapsn | ENSDARP00000021860 | ENSDARP00000060294 | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | Receptor-associated protein of the synapse, 43kD. | 0.833 |
| chrna2a | chrna1 | ENSDARP00000028704 | ENSDARP00000021860 | Cholinergic receptor, nicotinic, alpha 2a (neuronal). | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | 0.862 |
| chrna2a | chrna4b | ENSDARP00000028704 | ENSDARP00000022694 | Cholinergic receptor, nicotinic, alpha 2a (neuronal). | Neuronal nicotinic acetylcholine receptor alpha 4 subunit. | 0.825 |
| chrna2a | chrna7 | ENSDARP00000028704 | ENSDARP00000140114 | Cholinergic receptor, nicotinic, alpha 2a (neuronal). | Cholinergic receptor, nicotinic, alpha 7 (neuronal). | 0.793 |
| chrna2a | chrnb1 | ENSDARP00000028704 | ENSDARP00000092302 | Cholinergic receptor, nicotinic, alpha 2a (neuronal). | Cholinergic receptor, nicotinic, beta 1 (muscle). | 0.801 |
| chrna2a | chrne | ENSDARP00000028704 | ENSDARP00000116514 | Cholinergic receptor, nicotinic, alpha 2a (neuronal). | Cholinergic receptor, nicotinic, epsilon. | 0.794 |
| chrna4b | chrna1 | ENSDARP00000022694 | ENSDARP00000021860 | Neuronal nicotinic acetylcholine receptor alpha 4 subunit. | Acetylcholine receptor subunit alpha; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. | 0.867 |
| chrna4b | chrna2a | ENSDARP00000022694 | ENSDARP00000028704 | Neuronal nicotinic acetylcholine receptor alpha 4 subunit. | Cholinergic receptor, nicotinic, alpha 2a (neuronal). | 0.825 |
| chrna4b | chrna7 | ENSDARP00000022694 | ENSDARP00000140114 | Neuronal nicotinic acetylcholine receptor alpha 4 subunit. | Cholinergic receptor, nicotinic, alpha 7 (neuronal). | 0.793 |
| chrna4b | chrnb1 | ENSDARP00000022694 | ENSDARP00000092302 | Neuronal nicotinic acetylcholine receptor alpha 4 subunit. | Cholinergic receptor, nicotinic, beta 1 (muscle). | 0.791 |
| chrna4b | chrne | ENSDARP00000022694 | ENSDARP00000116514 | Neuronal nicotinic acetylcholine receptor alpha 4 subunit. | Cholinergic receptor, nicotinic, epsilon. | 0.802 |
page 1 of 4