STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selenbp1Methanethiol oxidase; Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria (By similarity). Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport (By similarity). (473 aa)    
Predicted Functional Partners:
sqor
Sulfide quinone oxidoreductase.
   
 
  0.902
ahcyl2a
Zgc:158222; Belongs to the adenosylhomocysteinase family.
     
 0.846
ahcyl2b
S-adenosylhomocysteine hydrolase-like 2; Belongs to the adenosylhomocysteinase family.
     
 0.834
ahcy
S-adenosylhomocysteine hydrolase; Belongs to the adenosylhomocysteinase family.
   
 
 0.827
cbsa
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.827
cbsb
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.827
ahcyl1
S-adenosylhomocysteine hydrolase-like 1; Belongs to the adenosylhomocysteinase family.
   
 
 0.826
TST
Sulfurtransferase.
   
 
 0.820
bhmt
Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism. Converts betaine and homocysteine to dimethylglycine and methionine, respectively. This reaction is also required for the irreversible oxidation of choline (By similarity).
   
 
 0.819
kyat3
Kynurenine--oxoglutarate transaminase 3; Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L- (seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro) (By sim [...]
   
 
 0.818
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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