STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
embEmbigin. (325 aa)    
Predicted Functional Partners:
SLC16A7
Zgc:165507 protein.
   
 0.943
saxo2
Stabilizer of axonemal microtubules 2.
   
  
 0.667
erich3
Glutamate-rich 3.
      
 0.618
cacnb3b
Calcium channel, voltage-dependent, beta 3b.
   
  
 0.615
klhl26
Kelch-like protein 26.
   
  
 0.568
cib3
Calcium and integrin-binding family member 3.
   
  
 0.557
odf3l2b
Outer dense fiber of sperm tails 3-like 2b.
      
 0.556
atp8a1
ATPase phospholipid-transporting 8A1.
      
 0.545
ATP8A1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.545
plcd4b
Phosphoinositide phospholipase C.
      
 0.540
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.