Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7F755_DANRE | X1WGL5_DANRE | ENSDARP00000110899 | ENSDARP00000129372 | Si:dkey-15j16.6. | Si:dkey-23k10.3. | 0.980 |
E7F755_DANRE | nitr3r.1l | ENSDARP00000110899 | ENSDARP00000063628 | Si:dkey-15j16.6. | Novel immune-type receptor 3,-related 1-like. | 0.979 |
E7F755_DANRE | ttpa | ENSDARP00000110899 | ENSDARP00000117556 | Si:dkey-15j16.6. | Tocopherol (alpha) transfer protein. | 0.441 |
X1WGL5_DANRE | E7F755_DANRE | ENSDARP00000129372 | ENSDARP00000110899 | Si:dkey-23k10.3. | Si:dkey-15j16.6. | 0.980 |
X1WGL5_DANRE | nitr3r.1l | ENSDARP00000129372 | ENSDARP00000063628 | Si:dkey-23k10.3. | Novel immune-type receptor 3,-related 1-like. | 0.979 |
X1WGL5_DANRE | ttpa | ENSDARP00000129372 | ENSDARP00000117556 | Si:dkey-23k10.3. | Tocopherol (alpha) transfer protein. | 0.441 |
col9a2 | ttpa | ENSDARP00000037624 | ENSDARP00000117556 | Procollagen, type IX, alpha 2. | Tocopherol (alpha) transfer protein. | 0.431 |
mttp | ttpa | ENSDARP00000024667 | ENSDARP00000117556 | Microsomal triglyceride transfer protein large subunit; Catalyzes the transport of triglyceride, cholesteryl ester, and phospholipid between phospholipid surfaces. Required for the secretion of plasma lipoproteins that contain apolipoprotein B. | Tocopherol (alpha) transfer protein. | 0.425 |
nitr3r.1l | E7F755_DANRE | ENSDARP00000063628 | ENSDARP00000110899 | Novel immune-type receptor 3,-related 1-like. | Si:dkey-15j16.6. | 0.979 |
nitr3r.1l | X1WGL5_DANRE | ENSDARP00000063628 | ENSDARP00000129372 | Novel immune-type receptor 3,-related 1-like. | Si:dkey-23k10.3. | 0.979 |
nitr3r.1l | ttpa | ENSDARP00000063628 | ENSDARP00000117556 | Novel immune-type receptor 3,-related 1-like. | Tocopherol (alpha) transfer protein. | 0.414 |
npl | ttpa | ENSDARP00000148018 | ENSDARP00000117556 | N-acetylneuraminate lyase; Catalyzes the cleavage of N-acetylneuraminic acid (sialic acid) to form pyruvate and N-acetylmannosamine via a Schiff base intermediate. It prevents sialic acids from being recycled and returning to the cell surface. Involved in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway (By similarity). | Tocopherol (alpha) transfer protein. | 0.560 |
nxnl1 | ttpa | ENSDARP00000117387 | ENSDARP00000117556 | Nucleoredoxin-like protein 1; May play a role in cone cell viability, slowing down cone degeneration, does not seem to play a role in degenerating rods. Belongs to the nucleoredoxin family. | Tocopherol (alpha) transfer protein. | 0.452 |
nxnl2 | ttpa | ENSDARP00000023608 | ENSDARP00000117556 | Nucleoredoxin-like 2. | Tocopherol (alpha) transfer protein. | 0.443 |
sult1st7 | ttpa | ENSDARP00000100395 | ENSDARP00000117556 | Sulfotransferase; Belongs to the sulfotransferase 1 family. | Tocopherol (alpha) transfer protein. | 0.804 |
ttpa | E7F755_DANRE | ENSDARP00000117556 | ENSDARP00000110899 | Tocopherol (alpha) transfer protein. | Si:dkey-15j16.6. | 0.441 |
ttpa | X1WGL5_DANRE | ENSDARP00000117556 | ENSDARP00000129372 | Tocopherol (alpha) transfer protein. | Si:dkey-23k10.3. | 0.441 |
ttpa | col9a2 | ENSDARP00000117556 | ENSDARP00000037624 | Tocopherol (alpha) transfer protein. | Procollagen, type IX, alpha 2. | 0.431 |
ttpa | mttp | ENSDARP00000117556 | ENSDARP00000024667 | Tocopherol (alpha) transfer protein. | Microsomal triglyceride transfer protein large subunit; Catalyzes the transport of triglyceride, cholesteryl ester, and phospholipid between phospholipid surfaces. Required for the secretion of plasma lipoproteins that contain apolipoprotein B. | 0.425 |
ttpa | nitr3r.1l | ENSDARP00000117556 | ENSDARP00000063628 | Tocopherol (alpha) transfer protein. | Novel immune-type receptor 3,-related 1-like. | 0.414 |
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