Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A2BFQ2_DANRE | cdk15 | ENSDARP00000117614 | ENSDARP00000075572 | Si:ch211-284e13.4. | Cyclin-dependent kinase 15; Serine/threonine-protein kinase involved in the control of the eukaryotic cell cycle, whose activity is controlled by an associated cyclin; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. | 0.613 |
A2BFQ2_DANRE | ephb3a | ENSDARP00000117614 | ENSDARP00000040208 | Si:ch211-284e13.4. | Ephrin type-B receptor 3; Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Generally has an overlapping and redundant function with EPHB2. Like EPHB2, functions in axon guidance during development. In addition to its role in axon guidance plays also an important re [...] | 0.596 |
A2BFQ2_DANRE | fer | ENSDARP00000117614 | ENSDARP00000155466 | Si:ch211-284e13.4. | Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. | 0.718 |
A2BFQ2_DANRE | grb2a | ENSDARP00000117614 | ENSDARP00000133720 | Si:ch211-284e13.4. | Growth factor receptor-bound protein 2a. | 0.580 |
A2BFQ2_DANRE | grb2b | ENSDARP00000117614 | ENSDARP00000122829 | Si:ch211-284e13.4. | Growth factor receptor-bound protein 2b. | 0.619 |
A2BFQ2_DANRE | igf1ra | ENSDARP00000117614 | ENSDARP00000017066 | Si:ch211-284e13.4. | Tyrosine-protein kinase receptor. | 0.556 |
A2BFQ2_DANRE | igf1rb | ENSDARP00000117614 | ENSDARP00000046541 | Si:ch211-284e13.4. | Tyrosine-protein kinase receptor. | 0.554 |
A2BFQ2_DANRE | insra | ENSDARP00000117614 | ENSDARP00000023951 | Si:ch211-284e13.4. | Tyrosine-protein kinase receptor. | 0.554 |
A2BFQ2_DANRE | insrb | ENSDARP00000117614 | ENSDARP00000096601 | Si:ch211-284e13.4. | Tyrosine-protein kinase receptor. | 0.554 |
A2BFQ2_DANRE | ptpn11a | ENSDARP00000117614 | ENSDARP00000076040 | Si:ch211-284e13.4. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.653 |
cdk15 | A2BFQ2_DANRE | ENSDARP00000075572 | ENSDARP00000117614 | Cyclin-dependent kinase 15; Serine/threonine-protein kinase involved in the control of the eukaryotic cell cycle, whose activity is controlled by an associated cyclin; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. | Si:ch211-284e13.4. | 0.613 |
ephb3a | A2BFQ2_DANRE | ENSDARP00000040208 | ENSDARP00000117614 | Ephrin type-B receptor 3; Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Generally has an overlapping and redundant function with EPHB2. Like EPHB2, functions in axon guidance during development. In addition to its role in axon guidance plays also an important re [...] | Si:ch211-284e13.4. | 0.596 |
fer | A2BFQ2_DANRE | ENSDARP00000155466 | ENSDARP00000117614 | Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. | Si:ch211-284e13.4. | 0.718 |
grb2a | A2BFQ2_DANRE | ENSDARP00000133720 | ENSDARP00000117614 | Growth factor receptor-bound protein 2a. | Si:ch211-284e13.4. | 0.580 |
grb2a | grb2b | ENSDARP00000133720 | ENSDARP00000122829 | Growth factor receptor-bound protein 2a. | Growth factor receptor-bound protein 2b. | 0.905 |
grb2a | igf1ra | ENSDARP00000133720 | ENSDARP00000017066 | Growth factor receptor-bound protein 2a. | Tyrosine-protein kinase receptor. | 0.925 |
grb2a | igf1rb | ENSDARP00000133720 | ENSDARP00000046541 | Growth factor receptor-bound protein 2a. | Tyrosine-protein kinase receptor. | 0.925 |
grb2a | insra | ENSDARP00000133720 | ENSDARP00000023951 | Growth factor receptor-bound protein 2a. | Tyrosine-protein kinase receptor. | 0.925 |
grb2a | insrb | ENSDARP00000133720 | ENSDARP00000096601 | Growth factor receptor-bound protein 2a. | Tyrosine-protein kinase receptor. | 0.925 |
grb2a | ptpn11a | ENSDARP00000133720 | ENSDARP00000076040 | Growth factor receptor-bound protein 2a. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.706 |
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