STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ano5bAnoctamin. (915 aa)    
Predicted Functional Partners:
dysf
Dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive).
      
 0.726
dpep2
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
      
 0.580
popdc2
Popeye domain-containing 2; Important for striated muscle differentiation and cardiac morphogenesis. Is also required for cardiac conduction system development, plays a regulatory function in heart rate dynamics mediated, at least in part, through cAMP-binding.
    
 
 0.543
zgc:77262
Zgc:77262.
      
 0.517
exoc3l4
Exocyst complex component 3-like 4.
      
 0.514
xirp1
Xin actin-binding repeat-containing protein 1; Protects actin filaments from depolymerization. Belongs to the Xin family.
   
  
 0.492
E7F7Z9_DANRE
Si:dkey-100n23.5.
      
 0.481
anxa5a
Annexin.
      
 0.480
arhgap21a
Rho GTPase-activating protein 21a.
   
  
 0.471
myofl
Myoferlin-like.
      
 0.454
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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