STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
renbpRenin-binding protein. (403 aa)    
Predicted Functional Partners:
nagk
N-acetylglucosamine kinase.
   
 
 0.910
npl
N-acetylneuraminate lyase; Catalyzes the cleavage of N-acetylneuraminic acid (sialic acid) to form pyruvate and N-acetylmannosamine via a Schiff base intermediate. It prevents sialic acids from being recycled and returning to the cell surface. Involved in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway (By similarity).
   
 
  0.909
nansa
N-acetylneuraminic acid synthase a.
     
 0.906
hexa
Beta-hexosaminidase.
   
 
  0.903
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.902
hexb
Beta-hexosaminidase.
   
 
  0.901
chia.4
Chitinase, acidic.4; Belongs to the glycosyl hydrolase 18 family.
     
  0.900
chia.6
Chitinase, acidic.6; Belongs to the glycosyl hydrolase 18 family.
     
  0.900
chia.3
Chitinase, acidic.3; Belongs to the glycosyl hydrolase 18 family.
     
  0.900
chia.5
Chitinase, acidic.6; Belongs to the glycosyl hydrolase 18 family.
     
  0.900
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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