Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cart1 | cryl1 | ENSDARP00000119187 | ENSDARP00000145972 | Cocaine- and amphetamine-regulated transcript 1. | Crystallin, lambda 1. | 0.864 |
cart1 | echs1 | ENSDARP00000119187 | ENSDARP00000001565 | Cocaine- and amphetamine-regulated transcript 1. | Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.759 |
cart1 | eci1 | ENSDARP00000119187 | ENSDARP00000002223 | Cocaine- and amphetamine-regulated transcript 1. | Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.731 |
cart1 | eci2 | ENSDARP00000119187 | ENSDARP00000130260 | Cocaine- and amphetamine-regulated transcript 1. | Enoyl-CoA delta isomerase 2. | 0.969 |
cart1 | hadh | ENSDARP00000119187 | ENSDARP00000050602 | Cocaine- and amphetamine-regulated transcript 1. | Hydroxyacyl-Coenzyme A dehydrogenase. | 0.863 |
cart1 | hmgcs1 | ENSDARP00000119187 | ENSDARP00000137373 | Cocaine- and amphetamine-regulated transcript 1. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.938 |
cart1 | hsdl2 | ENSDARP00000119187 | ENSDARP00000038205 | Cocaine- and amphetamine-regulated transcript 1. | Hydroxysteroid dehydrogenase-like protein 2; Has apparently no steroid dehydrogenase activity. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.888 |
cart1 | scp2a | ENSDARP00000119187 | ENSDARP00000009052 | Cocaine- and amphetamine-regulated transcript 1. | Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family. | 0.753 |
cart1 | scp2b | ENSDARP00000119187 | ENSDARP00000134278 | Cocaine- and amphetamine-regulated transcript 1. | Sterol carrier protein 2b. | 0.753 |
cart1 | zgc:101569 | ENSDARP00000119187 | ENSDARP00000116324 | Cocaine- and amphetamine-regulated transcript 1. | Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.759 |
cryl1 | cart1 | ENSDARP00000145972 | ENSDARP00000119187 | Crystallin, lambda 1. | Cocaine- and amphetamine-regulated transcript 1. | 0.864 |
cryl1 | echs1 | ENSDARP00000145972 | ENSDARP00000001565 | Crystallin, lambda 1. | Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.606 |
cryl1 | eci1 | ENSDARP00000145972 | ENSDARP00000002223 | Crystallin, lambda 1. | Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.822 |
cryl1 | eci2 | ENSDARP00000145972 | ENSDARP00000130260 | Crystallin, lambda 1. | Enoyl-CoA delta isomerase 2. | 0.852 |
cryl1 | hsdl2 | ENSDARP00000145972 | ENSDARP00000038205 | Crystallin, lambda 1. | Hydroxysteroid dehydrogenase-like protein 2; Has apparently no steroid dehydrogenase activity. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.939 |
cryl1 | scp2a | ENSDARP00000145972 | ENSDARP00000009052 | Crystallin, lambda 1. | Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family. | 0.915 |
cryl1 | scp2b | ENSDARP00000145972 | ENSDARP00000134278 | Crystallin, lambda 1. | Sterol carrier protein 2b. | 0.915 |
cryl1 | zgc:101569 | ENSDARP00000145972 | ENSDARP00000116324 | Crystallin, lambda 1. | Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.605 |
echs1 | cart1 | ENSDARP00000001565 | ENSDARP00000119187 | Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. | Cocaine- and amphetamine-regulated transcript 1. | 0.759 |
echs1 | cryl1 | ENSDARP00000001565 | ENSDARP00000145972 | Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. | Crystallin, lambda 1. | 0.606 |
page 1 of 6