Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ccdc157 | serpine3 | ENSDARP00000073207 | ENSDARP00000119846 | Coiled-coil domain-containing 157. | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | 0.534 |
habp2 | serpine3 | ENSDARP00000108264 | ENSDARP00000119846 | Hyaluronan-binding protein 2. | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | 0.500 |
pdcd10a | serpine3 | ENSDARP00000156496 | ENSDARP00000119846 | Programmed cell death protein 10-A; Promotes cell proliferation. Modulates apoptotic pathways. Increases mitogen-activated protein kinase activity. Important for cell migration, and for normal structure and assembly of the Golgi complex. Important for KDR/VEGFR2 signaling. Required for normal angiogenesis, vasculogenesis and hematopoiesis during embryonic development (By similarity). Required for normal cardiovascular development. | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | 0.692 |
plat | serpine3 | ENSDARP00000120778 | ENSDARP00000119846 | Plasminogen activator; Belongs to the peptidase S1 family. | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | 0.602 |
serpine3 | ccdc157 | ENSDARP00000119846 | ENSDARP00000073207 | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | Coiled-coil domain-containing 157. | 0.534 |
serpine3 | habp2 | ENSDARP00000119846 | ENSDARP00000108264 | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | Hyaluronan-binding protein 2. | 0.500 |
serpine3 | pdcd10a | ENSDARP00000119846 | ENSDARP00000156496 | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | Programmed cell death protein 10-A; Promotes cell proliferation. Modulates apoptotic pathways. Increases mitogen-activated protein kinase activity. Important for cell migration, and for normal structure and assembly of the Golgi complex. Important for KDR/VEGFR2 signaling. Required for normal angiogenesis, vasculogenesis and hematopoiesis during embryonic development (By similarity). Required for normal cardiovascular development. | 0.692 |
serpine3 | plat | ENSDARP00000119846 | ENSDARP00000120778 | Probable serpin E3; Probable serine protease inhibitor; Belongs to the serpin family. | Plasminogen activator; Belongs to the peptidase S1 family. | 0.602 |