Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYTB | rag1 | ENSDARP00000087881 | ENSDARP00000120100 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break b [...] | 0.852 |
CYTB | rag2 | ENSDARP00000087881 | ENSDARP00000068402 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | V(D)J recombination-activating protein 2; Core component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T- cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. DNA cleavage by the RAG complex occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the pho [...] | 0.776 |
cd4-1 | foxn1 | ENSDARP00000121210 | ENSDARP00000005855 | CD4-1 molecule. | Forkhead box N1. | 0.416 |
cd4-1 | gata1a | ENSDARP00000121210 | ENSDARP00000002330 | CD4-1 molecule. | GATA-binding protein 1a. | 0.401 |
cd4-1 | lck | ENSDARP00000121210 | ENSDARP00000131919 | CD4-1 molecule. | Tyrosine-protein kinase. | 0.917 |
cd4-1 | myb | ENSDARP00000121210 | ENSDARP00000070211 | CD4-1 molecule. | V-myb avian myeloblastosis viral oncogene homolog. | 0.472 |
cd4-1 | rag1 | ENSDARP00000121210 | ENSDARP00000120100 | CD4-1 molecule. | V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break b [...] | 0.844 |
cd4-1 | rag2 | ENSDARP00000121210 | ENSDARP00000068402 | CD4-1 molecule. | V(D)J recombination-activating protein 2; Core component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T- cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. DNA cleavage by the RAG complex occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the pho [...] | 0.855 |
cd4-1 | runx1 | ENSDARP00000121210 | ENSDARP00000112019 | CD4-1 molecule. | Runt-related transcription factor. | 0.557 |
foxn1 | cd4-1 | ENSDARP00000005855 | ENSDARP00000121210 | Forkhead box N1. | CD4-1 molecule. | 0.416 |
foxn1 | gata1a | ENSDARP00000005855 | ENSDARP00000002330 | Forkhead box N1. | GATA-binding protein 1a. | 0.452 |
foxn1 | ikzf1 | ENSDARP00000005855 | ENSDARP00000074176 | Forkhead box N1. | IKAROS family zinc finger 1 (Ikaros). | 0.738 |
foxn1 | lck | ENSDARP00000005855 | ENSDARP00000131919 | Forkhead box N1. | Tyrosine-protein kinase. | 0.607 |
foxn1 | myb | ENSDARP00000005855 | ENSDARP00000070211 | Forkhead box N1. | V-myb avian myeloblastosis viral oncogene homolog. | 0.568 |
foxn1 | rag1 | ENSDARP00000005855 | ENSDARP00000120100 | Forkhead box N1. | V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break b [...] | 0.845 |
foxn1 | rag2 | ENSDARP00000005855 | ENSDARP00000068402 | Forkhead box N1. | V(D)J recombination-activating protein 2; Core component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T- cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. DNA cleavage by the RAG complex occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the pho [...] | 0.620 |
foxn1 | runx1 | ENSDARP00000005855 | ENSDARP00000112019 | Forkhead box N1. | Runt-related transcription factor. | 0.430 |
gata1a | cd4-1 | ENSDARP00000002330 | ENSDARP00000121210 | GATA-binding protein 1a. | CD4-1 molecule. | 0.401 |
gata1a | foxn1 | ENSDARP00000002330 | ENSDARP00000005855 | GATA-binding protein 1a. | Forkhead box N1. | 0.452 |
gata1a | ikzf1 | ENSDARP00000002330 | ENSDARP00000074176 | GATA-binding protein 1a. | IKAROS family zinc finger 1 (Ikaros). | 0.829 |
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