STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apoa2Apolipoprotein A-II. (141 aa)    
Predicted Functional Partners:
apoa4b.1
Apolipoprotein A-IV b, tandem duplicate 1.
   
  
 0.829
apoa1b
Apolipoprotein A-Ib.
   
  
 0.779
apobb.1
Apolipoprotein Bb, tandem duplicate 1.
   
  
 0.767
fga
Fibrinogen alpha chain.
   
  
 0.752
tfa
Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.
   
  
 0.751
apoa1a
Proapolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT).
   
  
 0.750
fgg
Fibrinogen, gamma polypeptide.
   
  
 0.709
F1QHP3_DANRE
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
      
 0.645
ENSDARP00000141227
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
      
 0.645
c3a.1
Complement component c3a, duplicate 1.
   
  
 0.604
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.