STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efcab7EF-hand calcium-binding domain 7. (606 aa)    
Predicted Functional Partners:
iqce
IQ motif-containing E.
   
 
 0.946
cachd1
Cache domain-containing 1.
      
 0.802
ttc23
Tetratricopeptide repeat domain 23.
    
 
 0.797
capn15
Calpain 15; Belongs to the peptidase C2 family.
   
 
 0.779
efhc2
EF-hand domain-containing family member C2.
    
 
 0.761
raver2
Ribonucleoprotein, PTB-binding 2.
    
 
 0.740
efcc1
EF-hand and coiled-coil domain-containing 1.
      
 0.732
efcab11
EF-hand calcium-binding domain-containing protein 11.
   
  
 0.718
ppef1
Serine/threonine-protein phosphatase with EF-hands.
    
 
 0.713
necab2
N-terminal EF-hand calcium-binding protein 2.
    
 
 0.654
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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