STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpt2Carnitine O-palmitoyltransferase 2, mitochondrial. (669 aa)    
Predicted Functional Partners:
acadvl
Acyl-CoA dehydrogenase very long chain.
   
 0.989
acadm
Acyl-CoA dehydrogenase medium chain.
   
 0.982
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.981
acadl
Acyl-CoA dehydrogenase long chain.
   
 0.974
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.957
cpt1aa
Carnitine palmitoyltransferase 1Aa (liver); Belongs to the carnitine/choline acetyltransferase family.
  
 
0.938
cpt1b
Carnitine palmitoyltransferase 1B (muscle).
  
 
0.935
cpt1ab
Carnitine palmitoyltransferase 1Ab (liver); Belongs to the carnitine/choline acetyltransferase family.
  
 
0.935
cpt1cb
Carnitine palmitoyltransferase 1Cb; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.921
slc25a20
Solute carrier family 25 (Carnitine/acylcarnitine translocase), member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.911
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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