STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marveld2bMARVEL domain-containing 2b. (572 aa)    
Predicted Functional Partners:
tjp1a
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.939
marveld2a
MARVEL domain-containing 2a.
  
  
 
0.901
fndc7a
Fibronectin type III domain-containing 7a.
      
 0.852
ildr1b
Immunoglobulin-like domain-containing receptor 1b.
   
  
 0.781
mgat1b
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b.
      
 0.698
slitrk6
SLIT and NTRK-like family, member 6.
   
  
 0.671
ptprn2
Protein tyrosine phosphatase receptor type N2.
      
 0.668
tuba8l
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
  0.651
tuba4l
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
  0.651
tuba8l5
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
     
  0.650
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.