Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSDARP00000146995 | pfdn6 | ENSDARP00000146995 | ENSDARP00000053935 | Uncharacterized protein. | Prefoldin subunit 6. | 0.975 |
ENSDARP00000146995 | pih1d1 | ENSDARP00000146995 | ENSDARP00000055307 | Uncharacterized protein. | PIH1 domain-containing protein 1; Involved in the assembly of C/D box small nucleolar ribonucleoprotein (snoRNP) particles (By similarity). Recruits the SWI/SNF complex to the core promoter of rRNA genes and enhances pre- rRNA transcription (By similarity). Mediates interaction of TELO2 with the R2TP complex which is necessary for the stability of MTOR and SMG1 (By similarity). Positively regulates the assembly and activity of the mTORC1 complex (By similarity); Belongs to the PIH1 family. | 0.429 |
ENSDARP00000146995 | polr2ea | ENSDARP00000146995 | ENSDARP00000098657 | Uncharacterized protein. | RNA polymerase II subunit E. | 0.548 |
ENSDARP00000146995 | polr2eb | ENSDARP00000146995 | ENSDARP00000028718 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide E, b. | 0.548 |
ENSDARP00000146995 | rpap3 | ENSDARP00000146995 | ENSDARP00000107727 | Uncharacterized protein. | RNA polymerase II-associated protein 3. | 0.568 |
ENSDARP00000146995 | ruvbl1 | ENSDARP00000146995 | ENSDARP00000012488 | Uncharacterized protein. | RuvB-like 1; Has single-stranded DNA-stimulated ATPase and ATP-dependent DNA helicase (3' to 5') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP- dependent nucleosome sliding (By similarity). May act as a negative regulator of embryonic heart growth. Belongs to the RuvB family. | 0.588 |
ENSDARP00000146995 | ruvbl2 | ENSDARP00000146995 | ENSDARP00000072482 | Uncharacterized protein. | RuvB-like 2; Has double-stranded DNA-stimulated ATPase activity. Has ATP-dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). Represses gene activation mediated by beta-catenin. Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome- activated ATPase activity and catalyzes ATP-dependent nucleosome sliding (By similarity). Involved in the endoplasmic reticulum (ER)- associated degradation (ERAD) pathway where it negatively regulates expression of ER stress [...] | 0.585 |
ENSDARP00000146995 | uri1 | ENSDARP00000146995 | ENSDARP00000122374 | Uncharacterized protein. | URI1 prefoldin-like chaperone. | 0.784 |
ENSDARP00000146995 | uxt | ENSDARP00000146995 | ENSDARP00000020173 | Uncharacterized protein. | Ubiquitously-expressed, prefoldin-like chaperone. | 0.779 |
pfdn2 | pfdn6 | ENSDARP00000035261 | ENSDARP00000053935 | Prefoldin subunit 2. | Prefoldin subunit 6. | 0.999 |
pfdn2 | pih1d1 | ENSDARP00000035261 | ENSDARP00000055307 | Prefoldin subunit 2. | PIH1 domain-containing protein 1; Involved in the assembly of C/D box small nucleolar ribonucleoprotein (snoRNP) particles (By similarity). Recruits the SWI/SNF complex to the core promoter of rRNA genes and enhances pre- rRNA transcription (By similarity). Mediates interaction of TELO2 with the R2TP complex which is necessary for the stability of MTOR and SMG1 (By similarity). Positively regulates the assembly and activity of the mTORC1 complex (By similarity); Belongs to the PIH1 family. | 0.708 |
pfdn2 | polr2ea | ENSDARP00000035261 | ENSDARP00000098657 | Prefoldin subunit 2. | RNA polymerase II subunit E. | 0.689 |
pfdn2 | polr2eb | ENSDARP00000035261 | ENSDARP00000028718 | Prefoldin subunit 2. | Polymerase (RNA) II (DNA directed) polypeptide E, b. | 0.702 |
pfdn2 | rpap3 | ENSDARP00000035261 | ENSDARP00000107727 | Prefoldin subunit 2. | RNA polymerase II-associated protein 3. | 0.885 |
pfdn2 | ruvbl1 | ENSDARP00000035261 | ENSDARP00000012488 | Prefoldin subunit 2. | RuvB-like 1; Has single-stranded DNA-stimulated ATPase and ATP-dependent DNA helicase (3' to 5') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP- dependent nucleosome sliding (By similarity). May act as a negative regulator of embryonic heart growth. Belongs to the RuvB family. | 0.725 |
pfdn2 | ruvbl2 | ENSDARP00000035261 | ENSDARP00000072482 | Prefoldin subunit 2. | RuvB-like 2; Has double-stranded DNA-stimulated ATPase activity. Has ATP-dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). Represses gene activation mediated by beta-catenin. Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome- activated ATPase activity and catalyzes ATP-dependent nucleosome sliding (By similarity). Involved in the endoplasmic reticulum (ER)- associated degradation (ERAD) pathway where it negatively regulates expression of ER stress [...] | 0.718 |
pfdn2 | uri1 | ENSDARP00000035261 | ENSDARP00000122374 | Prefoldin subunit 2. | URI1 prefoldin-like chaperone. | 0.889 |
pfdn2 | uxt | ENSDARP00000035261 | ENSDARP00000020173 | Prefoldin subunit 2. | Ubiquitously-expressed, prefoldin-like chaperone. | 0.877 |
pfdn6 | ENSDARP00000146995 | ENSDARP00000053935 | ENSDARP00000146995 | Prefoldin subunit 6. | Uncharacterized protein. | 0.975 |
pfdn6 | pfdn2 | ENSDARP00000053935 | ENSDARP00000035261 | Prefoldin subunit 6. | Prefoldin subunit 2. | 0.999 |
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