STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhrs7bDehydrogenase/reductase SDR family member 7B; Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)    
Predicted Functional Partners:
tlcd1
TLC domain-containing 1.
    
 
 0.867
rimbp2-2
RIMS-binding protein 2.
      
 0.729
RIMBP2
Si:ch73-287m6.1.
      
 0.729
rimbp2
RIMS-binding protein 2.
      
 0.729
sardh
Sarcosine dehydrogenase.
   
 0.671
hsdl1
Inactive hydroxysteroid dehydrogenase-like protein 1.
  
 0.655
gnpat
Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
    
 
 0.650
FAR2
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
   
 
 0.646
meiob
Methionine sulfoxide reductase B1b.
    
 
 0.608
ak7a
Adenylate kinase 7a.
   
 
 0.589
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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