Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7F7A0_DANRE | muc13b | ENSDARP00000108535 | ENSDARP00000102897 | Si:ch211-198m17.1. | Mucin 13b, cell surface-associated. | 0.443 |
E7F7A0_DANRE | rbm39a | ENSDARP00000108535 | ENSDARP00000022349 | Si:ch211-198m17.1. | RNA-binding motif protein 39a. | 0.400 |
E7F7A0_DANRE | rbm39b | ENSDARP00000108535 | ENSDARP00000061327 | Si:ch211-198m17.1. | RNA-binding motif protein 39b. | 0.400 |
E7F7A0_DANRE | rnd2 | ENSDARP00000108535 | ENSDARP00000112911 | Si:ch211-198m17.1. | Rho family GTPase 2. | 0.505 |
E7F7A0_DANRE | uhrf1bp1l | ENSDARP00000108535 | ENSDARP00000122870 | Si:ch211-198m17.1. | UHRF1-binding protein 1-like. | 0.400 |
muc13b | E7F7A0_DANRE | ENSDARP00000102897 | ENSDARP00000108535 | Mucin 13b, cell surface-associated. | Si:ch211-198m17.1. | 0.443 |
muc13b | rbm39a | ENSDARP00000102897 | ENSDARP00000022349 | Mucin 13b, cell surface-associated. | RNA-binding motif protein 39a. | 0.414 |
muc13b | rbm39b | ENSDARP00000102897 | ENSDARP00000061327 | Mucin 13b, cell surface-associated. | RNA-binding motif protein 39b. | 0.414 |
muc13b | rnd2 | ENSDARP00000102897 | ENSDARP00000112911 | Mucin 13b, cell surface-associated. | Rho family GTPase 2. | 0.519 |
muc13b | uhrf1bp1l | ENSDARP00000102897 | ENSDARP00000122870 | Mucin 13b, cell surface-associated. | UHRF1-binding protein 1-like. | 0.400 |
polr2k | uhrf1bp1l | ENSDARP00000099037 | ENSDARP00000122870 | Polymerase (RNA) II (DNA directed) polypeptide K. | UHRF1-binding protein 1-like. | 0.412 |
rbm39a | E7F7A0_DANRE | ENSDARP00000022349 | ENSDARP00000108535 | RNA-binding motif protein 39a. | Si:ch211-198m17.1. | 0.400 |
rbm39a | muc13b | ENSDARP00000022349 | ENSDARP00000102897 | RNA-binding motif protein 39a. | Mucin 13b, cell surface-associated. | 0.414 |
rbm39a | rbm39b | ENSDARP00000022349 | ENSDARP00000061327 | RNA-binding motif protein 39a. | RNA-binding motif protein 39b. | 0.444 |
rbm39a | rnd2 | ENSDARP00000022349 | ENSDARP00000112911 | RNA-binding motif protein 39a. | Rho family GTPase 2. | 0.511 |
rbm39a | uhrf1bp1l | ENSDARP00000022349 | ENSDARP00000122870 | RNA-binding motif protein 39a. | UHRF1-binding protein 1-like. | 0.410 |
rbm39b | E7F7A0_DANRE | ENSDARP00000061327 | ENSDARP00000108535 | RNA-binding motif protein 39b. | Si:ch211-198m17.1. | 0.400 |
rbm39b | muc13b | ENSDARP00000061327 | ENSDARP00000102897 | RNA-binding motif protein 39b. | Mucin 13b, cell surface-associated. | 0.414 |
rbm39b | rbm39a | ENSDARP00000061327 | ENSDARP00000022349 | RNA-binding motif protein 39b. | RNA-binding motif protein 39a. | 0.444 |
rbm39b | rnd2 | ENSDARP00000061327 | ENSDARP00000112911 | RNA-binding motif protein 39b. | Rho family GTPase 2. | 0.511 |
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