STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpd1lGlycerol-3-phosphate dehydrogenase 1-like protein; Plays a role in regulating cardiac sodium current. (351 aa)    
Predicted Functional Partners:
gnpat
Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
    
 0.957
B8JM22_DANRE
Si:ch73-21k16.5.
    
 0.951
adprm
Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; Hydrolyzes ADP-ribose, IDP-ribose, CDP-glycerol, CDP-choline and CDP-ethanolamine, but not other non-reducing ADP-sugars or CDP- glucose.
     
 0.901
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
 0.869
tkfc
Triokinase/FMN cyclase.
   
 
 0.851
gpat3
Glycerol-3-phosphate acyltransferase 3; Converts glycerol-3-phosphate to 1-acyl-sn-glycerol-3- phosphate (lysophosphatidic acid or LPA) by incorporating an acyl moiety at the sn-1 position of the glycerol backbone (By similarity). Also converts LPA into 1,2-diacyl-sn-glycerol-3-phosphate (phosphatidic acid or PA) by incorporating an acyl moiety at the sn-2 position of the glycerol backbone (By similarity).
  
 
 0.843
gpat2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
    
 0.828
gpam
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
    
 0.828
plpp5
Phospholipid phosphatase 5.
  
 
 0.821
gpat4
Glycerol-3-phosphate acyltransferase 4.
  
 
 0.808
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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