Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7F2N1_DANRE | fam214b | ENSDARP00000107548 | ENSDARP00000123502 | Si:ch73-352p4.5. | Family with sequence similarity 214 member B. | 0.479 |
E7F2N1_DANRE | spata6 | ENSDARP00000107548 | ENSDARP00000114482 | Si:ch73-352p4.5. | Spermatogenesis-associated 6. | 0.432 |
E7F2N1_DANRE | znhit1 | ENSDARP00000107548 | ENSDARP00000071271 | Si:ch73-352p4.5. | Zinc finger, HIT-type-containing 1. | 0.473 |
fam214b | E7F2N1_DANRE | ENSDARP00000123502 | ENSDARP00000107548 | Family with sequence similarity 214 member B. | Si:ch73-352p4.5. | 0.479 |
fam214b | spata6 | ENSDARP00000123502 | ENSDARP00000114482 | Family with sequence similarity 214 member B. | Spermatogenesis-associated 6. | 0.469 |
fam214b | znhit1 | ENSDARP00000123502 | ENSDARP00000071271 | Family with sequence similarity 214 member B. | Zinc finger, HIT-type-containing 1. | 0.528 |
spata6 | E7F2N1_DANRE | ENSDARP00000114482 | ENSDARP00000107548 | Spermatogenesis-associated 6. | Si:ch73-352p4.5. | 0.432 |
spata6 | fam214b | ENSDARP00000114482 | ENSDARP00000123502 | Spermatogenesis-associated 6. | Family with sequence similarity 214 member B. | 0.469 |
spata6 | znhit1 | ENSDARP00000114482 | ENSDARP00000071271 | Spermatogenesis-associated 6. | Zinc finger, HIT-type-containing 1. | 0.439 |
znhit1 | E7F2N1_DANRE | ENSDARP00000071271 | ENSDARP00000107548 | Zinc finger, HIT-type-containing 1. | Si:ch73-352p4.5. | 0.473 |
znhit1 | fam214b | ENSDARP00000071271 | ENSDARP00000123502 | Zinc finger, HIT-type-containing 1. | Family with sequence similarity 214 member B. | 0.528 |
znhit1 | spata6 | ENSDARP00000071271 | ENSDARP00000114482 | Zinc finger, HIT-type-containing 1. | Spermatogenesis-associated 6. | 0.439 |