STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam214bFamily with sequence similarity 214, member B (599 aa)    
Predicted Functional Partners:
alg3
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol
   
    0.856
ints1
Integrator complex subunit 1
   
    0.856
DUOXA1
Dual oxidase maturation factor 1
   
    0.856
lzts1
Leucine zipper, putative tumor suppressor 1
   
    0.856
eif4enif1
Eukaryotic translation initiation factor 4E nuclear import factor 1
   
    0.856
adpgk
ADP-dependent glucokinase
   
    0.856
mad1l1
MAD1 mitotic arrest deficient-like 1
      
 0.817
exoc3l1
Exocyst complex component 3-like protein; As part of the exocyst, may play a role in regulated exocytosis
   
    0.810
col4a6
Collagen, type IV, alpha 6; Belongs to the type IV collagen family
      
 0.773
ENSDARG00000079061
ATP-binding cassette, sub-family A (ABC1), member 3
   
    0.714
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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