Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
chd9 | elk3 | ENSDARP00000142882 | ENSDARP00000123783 | Chromodomain helicase DNA-binding protein 9. | ETS transcription factor ELK3. | 0.482 |
chd9 | gtf2e2 | ENSDARP00000142882 | ENSDARP00000020885 | Chromodomain helicase DNA-binding protein 9. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.490 |
chd9 | zbtb18 | ENSDARP00000142882 | ENSDARP00000141791 | Chromodomain helicase DNA-binding protein 9. | Zinc finger and BTB domain-containing protein 18; Transcriptional repressor that plays a role in various developmental processes. Specifically binds the consensus DNA sequence 5'-[AC]ACATCTG[GT][AC]-3' which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes (By similarity). Belongs to the krueppel C2H2-type zinc-finger protein family. ZBTB18 subfamily. | 0.447 |
elf1 | elk3 | ENSDARP00000107670 | ENSDARP00000123783 | E74-like ETS transcription factor 1. | ETS transcription factor ELK3. | 0.481 |
elk3 | chd9 | ENSDARP00000123783 | ENSDARP00000142882 | ETS transcription factor ELK3. | Chromodomain helicase DNA-binding protein 9. | 0.482 |
elk3 | elf1 | ENSDARP00000123783 | ENSDARP00000107670 | ETS transcription factor ELK3. | E74-like ETS transcription factor 1. | 0.481 |
elk3 | ets1 | ENSDARP00000123783 | ENSDARP00000033758 | ETS transcription factor ELK3. | V-ets avian erythroblastosis virus E26 oncogene homolog 1. | 0.506 |
elk3 | gtf2e2 | ENSDARP00000123783 | ENSDARP00000020885 | ETS transcription factor ELK3. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.664 |
elk3 | nme2b.1 | ENSDARP00000123783 | ENSDARP00000136238 | ETS transcription factor ELK3. | Nucleoside diphosphate kinase. | 0.480 |
elk3 | npas1 | ENSDARP00000123783 | ENSDARP00000146804 | ETS transcription factor ELK3. | Neuronal PAS domain protein 1. | 0.512 |
elk3 | srfa | ENSDARP00000123783 | ENSDARP00000070519 | ETS transcription factor ELK3. | Serum response factor a. | 0.570 |
elk3 | srfb | ENSDARP00000123783 | ENSDARP00000134321 | ETS transcription factor ELK3. | Serum response factor b. | 0.567 |
elk3 | tlk1a | ENSDARP00000123783 | ENSDARP00000107861 | ETS transcription factor ELK3. | Tousled-like kinase 1a. | 0.660 |
elk3 | zbtb18 | ENSDARP00000123783 | ENSDARP00000141791 | ETS transcription factor ELK3. | Zinc finger and BTB domain-containing protein 18; Transcriptional repressor that plays a role in various developmental processes. Specifically binds the consensus DNA sequence 5'-[AC]ACATCTG[GT][AC]-3' which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes (By similarity). Belongs to the krueppel C2H2-type zinc-finger protein family. ZBTB18 subfamily. | 0.562 |
ets1 | elk3 | ENSDARP00000033758 | ENSDARP00000123783 | V-ets avian erythroblastosis virus E26 oncogene homolog 1. | ETS transcription factor ELK3. | 0.506 |
ets1 | srfa | ENSDARP00000033758 | ENSDARP00000070519 | V-ets avian erythroblastosis virus E26 oncogene homolog 1. | Serum response factor a. | 0.400 |
gtf2e2 | chd9 | ENSDARP00000020885 | ENSDARP00000142882 | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | Chromodomain helicase DNA-binding protein 9. | 0.490 |
gtf2e2 | elk3 | ENSDARP00000020885 | ENSDARP00000123783 | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | ETS transcription factor ELK3. | 0.664 |
gtf2e2 | nme2b.1 | ENSDARP00000020885 | ENSDARP00000136238 | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | Nucleoside diphosphate kinase. | 0.483 |
gtf2e2 | zbtb18 | ENSDARP00000020885 | ENSDARP00000141791 | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | Zinc finger and BTB domain-containing protein 18; Transcriptional repressor that plays a role in various developmental processes. Specifically binds the consensus DNA sequence 5'-[AC]ACATCTG[GT][AC]-3' which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes (By similarity). Belongs to the krueppel C2H2-type zinc-finger protein family. ZBTB18 subfamily. | 0.582 |
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