Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F1QN45_DANRE | cdcp1a | ENSDARP00000117883 | ENSDARP00000124759 | Si:dkey-88l16.3. | CUB domain-containing protein 1a. | 0.744 |
cdcp1a | F1QN45_DANRE | ENSDARP00000124759 | ENSDARP00000117883 | CUB domain-containing protein 1a. | Si:dkey-88l16.3. | 0.744 |
cdcp1a | ctso | ENSDARP00000124759 | ENSDARP00000069272 | CUB domain-containing protein 1a. | Cathepsin O; Belongs to the peptidase C1 family. | 0.421 |
cdcp1a | lrp1ba | ENSDARP00000124759 | ENSDARP00000151578 | CUB domain-containing protein 1a. | Low density lipoprotein receptor-related protein 1Ba. | 0.545 |
ctso | cdcp1a | ENSDARP00000069272 | ENSDARP00000124759 | Cathepsin O; Belongs to the peptidase C1 family. | CUB domain-containing protein 1a. | 0.421 |
lrp1ba | cdcp1a | ENSDARP00000151578 | ENSDARP00000124759 | Low density lipoprotein receptor-related protein 1Ba. | CUB domain-containing protein 1a. | 0.545 |