STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ighv4-6Immunoglobulin heavy variable 4-6. (113 aa)    
Predicted Functional Partners:
ighz
Immunoglobulin heavy constant zeta.
     
 0.817
ighv8-1
Immunoglobulin heavy variable 8-1.
  
  
 
0.582
ighv3-2
Immunoglobulin heavy variable 3-2.
  
  
 
0.579
ighv1-2
Immunoglobulin heavy variable 1-2.
  
  
0.578
ighv1-1
Immunoglobulin heavy variable 1-1.
  
  
0.575
ighv13-2
Immunoglobulin heavy variable 13-2.
  
  
 
0.575
ighv4-3-2
Immunoglobulin heavy variable 4-3.
  
  
 
0.573
ighv11-2
Immunoglobulin heavy variable 11-2.
  
  
 
0.572
ighv8-2
Immunoglobulin heavy variable 8-2.
  
  
 
0.572
ighv9-3
Immunoglobulin heavy variable 9-3.
  
  
 
0.571
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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