STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap32aRho GTPase-activating protein 32a. (1676 aa)    
Predicted Functional Partners:
ptbp2a
Polypyrimidine tract-binding protein 2a.
      
 0.570
rhoq
Ras homolog gene family, member Q.
   
 0.555
cdc42l2
Cell division cycle 42-like 2.
   
 0.511
rac1a
Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP binding protein Rac1).
   
 0.488
arhgap1
Rho GTPase-activating protein 1.
   
 
0.475
cdc42ep4b
CDC42 effector protein (Rho GTPase-binding) 4b.
     
 0.458
arhgap10
Rho GTPase-activating protein 10.
   
0.456
arhgap25
Rho GTPase-activating protein 25.
   
 
0.452
arhgap17a
Rho GTPase-activating protein 17a.
   
 
0.442
arhgap44
Rho GTPase-activating protein 44.
   
 
0.442
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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