Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RUNDC1 | ccdc186 | ENSDARP00000126082 | ENSDARP00000127125 | Si:dkey-151m15.5. | Si:ch211-225b10.4. | 0.594 |
RUNDC1 | eipr1 | ENSDARP00000126082 | ENSDARP00000063737 | Si:dkey-151m15.5. | EARP-interacting protein homolog; Belongs to the WD repeat EIPR1 family. | 0.473 |
RUNDC1 | vps51 | ENSDARP00000126082 | ENSDARP00000083577 | Si:dkey-151m15.5. | Vacuolar protein sorting-associated protein 51 homolog; Involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of protein retrieval from endosomes to the TGN, acid hydrolase sorting, lysosome function, endosomal cholesterol traffic and autophagy. Acts as component of the EARP complex that is involved in endocytic recycling (By similarity). | 0.601 |
RUNDC1 | vps52 | ENSDARP00000126082 | ENSDARP00000140259 | Si:dkey-151m15.5. | VPS52 subunit of GARP complex. | 0.467 |
RUNDC1 | vps54 | ENSDARP00000126082 | ENSDARP00000138816 | Si:dkey-151m15.5. | VPS54 subunit of GARP complex. | 0.478 |
ZNF462 | ccdc186 | ENSDARP00000153777 | ENSDARP00000127125 | Zinc finger protein 462. | Si:ch211-225b10.4. | 0.644 |
ZNF462 | mcm3ap | ENSDARP00000153777 | ENSDARP00000019686 | Zinc finger protein 462. | Minichromosome maintenance complex component 3-associated protein. | 0.476 |
ccdc186 | RUNDC1 | ENSDARP00000127125 | ENSDARP00000126082 | Si:ch211-225b10.4. | Si:dkey-151m15.5. | 0.594 |
ccdc186 | ZNF462 | ENSDARP00000127125 | ENSDARP00000153777 | Si:ch211-225b10.4. | Zinc finger protein 462. | 0.644 |
ccdc186 | ccdc22 | ENSDARP00000127125 | ENSDARP00000090542 | Si:ch211-225b10.4. | Coiled-coil domain-containing protein 22; May be involved in regulation of NF-kappa-B signaling. May be involved in copper-dependent atp7a trafficking between the trans-Golgi network and vesicles in the cell periphery (By similarity). | 0.559 |
ccdc186 | cep350 | ENSDARP00000127125 | ENSDARP00000084687 | Si:ch211-225b10.4. | Centrosomal protein 350. | 0.543 |
ccdc186 | dmxl2 | ENSDARP00000127125 | ENSDARP00000142022 | Si:ch211-225b10.4. | Dmx-like 2. | 0.679 |
ccdc186 | eipr1 | ENSDARP00000127125 | ENSDARP00000063737 | Si:ch211-225b10.4. | EARP-interacting protein homolog; Belongs to the WD repeat EIPR1 family. | 0.695 |
ccdc186 | mcm3ap | ENSDARP00000127125 | ENSDARP00000019686 | Si:ch211-225b10.4. | Minichromosome maintenance complex component 3-associated protein. | 0.867 |
ccdc186 | vps51 | ENSDARP00000127125 | ENSDARP00000083577 | Si:ch211-225b10.4. | Vacuolar protein sorting-associated protein 51 homolog; Involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of protein retrieval from endosomes to the TGN, acid hydrolase sorting, lysosome function, endosomal cholesterol traffic and autophagy. Acts as component of the EARP complex that is involved in endocytic recycling (By similarity). | 0.662 |
ccdc186 | vps52 | ENSDARP00000127125 | ENSDARP00000140259 | Si:ch211-225b10.4. | VPS52 subunit of GARP complex. | 0.598 |
ccdc186 | vps54 | ENSDARP00000127125 | ENSDARP00000138816 | Si:ch211-225b10.4. | VPS54 subunit of GARP complex. | 0.660 |
ccdc22 | ccdc186 | ENSDARP00000090542 | ENSDARP00000127125 | Coiled-coil domain-containing protein 22; May be involved in regulation of NF-kappa-B signaling. May be involved in copper-dependent atp7a trafficking between the trans-Golgi network and vesicles in the cell periphery (By similarity). | Si:ch211-225b10.4. | 0.559 |
cep350 | ccdc186 | ENSDARP00000084687 | ENSDARP00000127125 | Centrosomal protein 350. | Si:ch211-225b10.4. | 0.543 |
dmxl2 | ccdc186 | ENSDARP00000142022 | ENSDARP00000127125 | Dmx-like 2. | Si:ch211-225b10.4. | 0.679 |
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