STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
p2ry11Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family. (324 aa)    
Predicted Functional Partners:
rrp15
RRP15-like protein; Belongs to the RRP15 family.
   
 
 0.959
rsl1d1
Ribosomal L1 domain-containing 1.
   
   0.954
rpf1
Ribosome production factor 1; May be required for ribosome biogenesis.
   
 
 0.938
ddx27
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.
   
   0.934
rrp1
Ribosomal RNA-processing 1.
   
 
 0.929
pes
Pescadillo; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.926
rbm28
RNA-binding motif protein 28.
   
   0.919
wdr74
WD repeat domain 74.
   
 
 0.918
ebna1bp2
EBNA1-binding protein 2.
   
 
 0.917
rpf2
Ribosome production factor 2 homolog.
   
 
 0.914
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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