STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbccTubulin folding cofactor C. (350 aa)    
Predicted Functional Partners:
tbcd
Tubulin folding cofactor D.
    
 
 0.947
tbce
Tubulin-specific chaperone E; Tubulin-folding protein; involved in the second step of the tubulin folding pathway.
    
 
 0.912
tbcb
Tubulin folding cofactor B.
      
 0.845
rabgap1l
RAB GTPase-activating protein 1-like.
      
 0.819
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.787
arl3b
ADP-ribosylation factor-like protein 3; Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase- activating proteins (GAP). Required for normal cytokinesis and cilia signaling. Required for targeting proteins to the ciliary membrane by releasing myristoylated protein from unc119 cargo adapters into the cilium (By similarity).
    
 
 0.693
skp1
S-phase kinase-associated protein 1A; Belongs to the SKP1 family.
      
 0.673
arl3a
ADP ribosylation factor-like GTPase 3a; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.644
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.598
rabgap1
RAB GTPase-activating protein 1.
      
 0.588
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.