Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC572297 | mxf | ENSDARP00000136275 | ENSDARP00000128551 | Uncharacterized protein. | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.841 |
LOC572297 | rsad2 | ENSDARP00000136275 | ENSDARP00000015681 | Uncharacterized protein. | Radical S-adenosyl methionine domain-containing protein 2; Interferon-inducible iron-sulfur (4FE-4S) cluster-binding antiviral protein which plays a major role in the cell antiviral state induced by type I and type II interferon; Belongs to the radical SAM superfamily. RSAD2 family. | 0.720 |
LOC572297 | usp18 | ENSDARP00000136275 | ENSDARP00000104564 | Uncharacterized protein. | Ubiquitin-specific peptidase 18; Belongs to the peptidase C19 family. | 0.476 |
gak | itsn1 | ENSDARP00000111020 | ENSDARP00000115952 | Cyclin G-associated kinase. | Intersectin 1 (SH3 domain protein). | 0.572 |
gak | itsn2a | ENSDARP00000111020 | ENSDARP00000062779 | Cyclin G-associated kinase. | Intersectin 2a. | 0.590 |
gak | itsn2b | ENSDARP00000111020 | ENSDARP00000081545 | Cyclin G-associated kinase. | Intersectin 2b. | 0.590 |
gak | mxf | ENSDARP00000111020 | ENSDARP00000128551 | Cyclin G-associated kinase. | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.638 |
itsn1 | gak | ENSDARP00000115952 | ENSDARP00000111020 | Intersectin 1 (SH3 domain protein). | Cyclin G-associated kinase. | 0.572 |
itsn1 | itsn2a | ENSDARP00000115952 | ENSDARP00000062779 | Intersectin 1 (SH3 domain protein). | Intersectin 2a. | 0.596 |
itsn1 | mxf | ENSDARP00000115952 | ENSDARP00000128551 | Intersectin 1 (SH3 domain protein). | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.588 |
itsn2a | gak | ENSDARP00000062779 | ENSDARP00000111020 | Intersectin 2a. | Cyclin G-associated kinase. | 0.590 |
itsn2a | itsn1 | ENSDARP00000062779 | ENSDARP00000115952 | Intersectin 2a. | Intersectin 1 (SH3 domain protein). | 0.596 |
itsn2a | mxf | ENSDARP00000062779 | ENSDARP00000128551 | Intersectin 2a. | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.675 |
itsn2b | gak | ENSDARP00000081545 | ENSDARP00000111020 | Intersectin 2b. | Cyclin G-associated kinase. | 0.590 |
itsn2b | mxf | ENSDARP00000081545 | ENSDARP00000128551 | Intersectin 2b. | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.675 |
loxl2a | mxf | ENSDARP00000064612 | ENSDARP00000128551 | Lysyl oxidase homolog 2A; Mediates the post-translational oxidative deamination of lysine residues on target proteins leading to the formation of deaminated lysine (allysine) (By similarity). Acts as a transcription corepressor and specifically mediates deamination of trimethylated 'Lys-4' of histone H3 (H3K4me3), a specific tag for epigenetic transcriptional activation (By similarity). Shows no activity against histone H3 when it is trimethylated on 'Lys-9' (H3K9me3) or 'Lys-27' (H3K27me3) or when 'Lys-4' is monomethylated (H3K4me1) or dimethylated (H3K4me2) (By similarity). Also medi [...] | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.587 |
mxf | LOC572297 | ENSDARP00000128551 | ENSDARP00000136275 | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Uncharacterized protein. | 0.841 |
mxf | gak | ENSDARP00000128551 | ENSDARP00000111020 | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Cyclin G-associated kinase. | 0.638 |
mxf | itsn1 | ENSDARP00000128551 | ENSDARP00000115952 | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Intersectin 1 (SH3 domain protein). | 0.588 |
mxf | itsn2a | ENSDARP00000128551 | ENSDARP00000062779 | Myxovirus (influenza virus) resistance F; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Intersectin 2a. | 0.675 |
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