Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7EZT8_DANRE | arid4a | ENSDARP00000093294 | ENSDARP00000064411 | Si:ch211-262i1.5. | AT-rich interactive domain 4A (RBP1-like). | 0.696 |
E7EZT8_DANRE | arid4b | ENSDARP00000093294 | ENSDARP00000107839 | Si:ch211-262i1.5. | Translocase of outer mitochondrial membrane 20. | 0.696 |
E7EZT8_DANRE | hdac1 | ENSDARP00000093294 | ENSDARP00000051798 | Si:ch211-262i1.5. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.921 |
E7EZT8_DANRE | hdac11 | ENSDARP00000093294 | ENSDARP00000134194 | Si:ch211-262i1.5. | Histone deacetylase 11. | 0.692 |
E7EZT8_DANRE | hdac3 | ENSDARP00000093294 | ENSDARP00000054625 | Si:ch211-262i1.5. | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (By similarity). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). Histone deacetylases act via the formation of large multiprotein complexes (By similarity). May play a role in the regulation of the circadian clock in a deacetylase activity-independent manner (By similarity). | 0.921 |
E7EZT8_DANRE | hdac7b | ENSDARP00000093294 | ENSDARP00000128596 | Si:ch211-262i1.5. | Histone deacetylase 7b. | 0.692 |
E7EZT8_DANRE | hdac8 | ENSDARP00000093294 | ENSDARP00000017858 | Si:ch211-262i1.5. | Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity). | 0.921 |
LOC566646 | arid4a | ENSDARP00000134449 | ENSDARP00000064411 | Si:ch211-9d9.1. | AT-rich interactive domain 4A (RBP1-like). | 0.696 |
LOC566646 | arid4b | ENSDARP00000134449 | ENSDARP00000107839 | Si:ch211-9d9.1. | Translocase of outer mitochondrial membrane 20. | 0.696 |
LOC566646 | hdac1 | ENSDARP00000134449 | ENSDARP00000051798 | Si:ch211-9d9.1. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.921 |
LOC566646 | hdac11 | ENSDARP00000134449 | ENSDARP00000134194 | Si:ch211-9d9.1. | Histone deacetylase 11. | 0.692 |
LOC566646 | hdac3 | ENSDARP00000134449 | ENSDARP00000054625 | Si:ch211-9d9.1. | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (By similarity). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). Histone deacetylases act via the formation of large multiprotein complexes (By similarity). May play a role in the regulation of the circadian clock in a deacetylase activity-independent manner (By similarity). | 0.921 |
LOC566646 | hdac7b | ENSDARP00000134449 | ENSDARP00000128596 | Si:ch211-9d9.1. | Histone deacetylase 7b. | 0.692 |
LOC566646 | hdac8 | ENSDARP00000134449 | ENSDARP00000017858 | Si:ch211-9d9.1. | Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity). | 0.921 |
arid4a | E7EZT8_DANRE | ENSDARP00000064411 | ENSDARP00000093294 | AT-rich interactive domain 4A (RBP1-like). | Si:ch211-262i1.5. | 0.696 |
arid4a | LOC566646 | ENSDARP00000064411 | ENSDARP00000134449 | AT-rich interactive domain 4A (RBP1-like). | Si:ch211-9d9.1. | 0.696 |
arid4a | hdac1 | ENSDARP00000064411 | ENSDARP00000051798 | AT-rich interactive domain 4A (RBP1-like). | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.960 |
arid4a | hdac11 | ENSDARP00000064411 | ENSDARP00000134194 | AT-rich interactive domain 4A (RBP1-like). | Histone deacetylase 11. | 0.783 |
arid4a | hdac3 | ENSDARP00000064411 | ENSDARP00000054625 | AT-rich interactive domain 4A (RBP1-like). | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (By similarity). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). Histone deacetylases act via the formation of large multiprotein complexes (By similarity). May play a role in the regulation of the circadian clock in a deacetylase activity-independent manner (By similarity). | 0.918 |
arid4a | hdac7b | ENSDARP00000064411 | ENSDARP00000128596 | AT-rich interactive domain 4A (RBP1-like). | Histone deacetylase 7b. | 0.783 |
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