STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDPGP1GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells; Belongs to the GDPGP1 family. (343 aa)    
Predicted Functional Partners:
ggnbp2
Gametogenetin-binding protein 2.
      
 0.663
mrps6
Mitochondrial ribosomal protein S6.
    
 
 0.641
amd1
S-adenosylmethionine decarboxylase proenzyme.
   
  
 0.586
uxs1
UDP-glucuronic acid decarboxylase 1; Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development. Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.
   
 
 0.538
mrpl15
39S ribosomal protein L15, mitochondrial; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.508
mrpl46
Mitochondrial ribosomal protein L46.
   
   0.492
mrpl36
39S ribosomal protein L36, mitochondrial; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.480
mrpl41
39S ribosomal protein L41, mitochondrial; Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle (By similarity).
    
   0.478
mrpl23
39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.
    
   0.478
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
   0.478
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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