STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5RG14_DANRESi:dkey-241l7.6. (152 aa)    
Predicted Functional Partners:
F1R3Z3_DANRE
Si:ch73-343l4.6.
  
     0.504
B8JM28_DANRE
Si:ch73-343l4.5.
  
     0.496
B8JM29_DANRE
Si:ch73-343l4.6.
  
     0.489
B8JM30_DANRE
Si:ch73-343l4.8.
  
     0.484
zmp:0000000937
Zmp:0000000937.
  
     0.476
F1R2Z5_DANRE
Si:ch73-343l4.2.
  
     0.428
F1QR69_DANRE
Si:ch211-214k5.3.
  
     0.422
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.