STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc42Cell division cycle 42. (191 aa)    
Predicted Functional Partners:
iqgap1
IQ motif-containing GTPase-activating protein 1.
   
 0.995
wasa
WASP actin nucleation-promoting factor a.
   
 0.992
wasb
WASP actin nucleation-promoting factor b.
   
 0.992
pard6gb
Par-6 partitioning defective 6-like protein gamma.
    
 0.989
pard6a
Par-6 family cell polarity regulator alpha.
    
 0.987
pard3ab
Par-3 family cell polarity regulator alpha, b.
    
 
 0.987
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.986
pak1
Non-specific serine/threonine protein kinase.
   
 0.986
waslb
WASP-like actin nucleation-promoting factor b.
   
 0.978
pard6ga
Par-6 family cell polarity regulator gamma a.
    
 0.976
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.