STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101885237Uncharacterized protein. (321 aa)    
Predicted Functional Partners:
LOC110437711
Ig-like domain-containing protein.
    
 
 0.856
LOC103909548
Ig-like domain-containing protein.
    
 
 0.856
heca
Hdc homolog, cell cycle regulator.
      
 0.838
LOC110438301
Si:ch211-226h8.6.
    
 
 0.750
LOC101884175
SCY domain-containing protein.
   
 
 0.749
dhrs13b.2
Dehydrogenase/reductase (SDR family) member 13b.2.
      
 0.745
ENSDARP00000136326
Si:zfos-1069f5.1.
   
  
 0.672
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
    
 
 0.646
hspa14
Heat shock 70 kDa protein 14; Component of the ribosome-associated complex (RAC), a complex involved in folding or maintaining nascent polypeptides in a folding- competent state.
    
 
 0.571
tapbp.1
TAP-binding protein (tapasin), tandem duplicate 1.
    
 
 0.570
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.