Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MW7_0006 | MW7_1013 | MW7_0006 | MW7_1013 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | Putative ATP-dependent Helicase; Protein involved in DNA binding and auxin biosynthetic process. | 0.735 |
| MW7_0006 | MW7_1832 | MW7_0006 | MW7_1832 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | 0.889 |
| MW7_0006 | MW7_2951 | MW7_0006 | MW7_2951 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | Helicase domain-containing protein; Protein involved in DNA binding and auxin biosynthetic process. | 0.989 |
| MW7_0006 | ligD | MW7_0006 | MW7_2840 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | Protein involved in DNA primase activity and DNA replication, synthesis of RNA primer. | 0.995 |
| MW7_0006 | mutL | MW7_0006 | MW7_2688 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | MutL protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.957 |
| MW7_0006 | mutS | MW7_0006 | MW7_0397 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.994 |
| MW7_0006 | polA | MW7_0006 | MW7_0937 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
| MW7_0006 | recA | MW7_0006 | MW7_2364 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.948 |
| MW7_0006 | recQ | MW7_0006 | MW7_0733 | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | ATP-dependent DNA helicase; Protein involved in nucleic acid binding and DNA replication. | 0.903 |
| MW7_1013 | MW7_0006 | MW7_1013 | MW7_0006 | Putative ATP-dependent Helicase; Protein involved in DNA binding and auxin biosynthetic process. | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | 0.735 |
| MW7_1013 | MW7_1832 | MW7_1013 | MW7_1832 | Putative ATP-dependent Helicase; Protein involved in DNA binding and auxin biosynthetic process. | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | 0.986 |
| MW7_1013 | MW7_2951 | MW7_1013 | MW7_2951 | Putative ATP-dependent Helicase; Protein involved in DNA binding and auxin biosynthetic process. | Helicase domain-containing protein; Protein involved in DNA binding and auxin biosynthetic process. | 0.912 |
| MW7_1013 | ligD | MW7_1013 | MW7_2840 | Putative ATP-dependent Helicase; Protein involved in DNA binding and auxin biosynthetic process. | Protein involved in DNA primase activity and DNA replication, synthesis of RNA primer. | 0.765 |
| MW7_1013 | polA | MW7_1013 | MW7_0937 | Putative ATP-dependent Helicase; Protein involved in DNA binding and auxin biosynthetic process. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.980 |
| MW7_1832 | MW7_0006 | MW7_1832 | MW7_0006 | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | Dna polymerase beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...] | 0.889 |
| MW7_1832 | MW7_1013 | MW7_1832 | MW7_1013 | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | Putative ATP-dependent Helicase; Protein involved in DNA binding and auxin biosynthetic process. | 0.986 |
| MW7_1832 | MW7_2951 | MW7_1832 | MW7_2951 | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | Helicase domain-containing protein; Protein involved in DNA binding and auxin biosynthetic process. | 0.938 |
| MW7_1832 | ligD | MW7_1832 | MW7_2840 | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | Protein involved in DNA primase activity and DNA replication, synthesis of RNA primer. | 0.835 |
| MW7_1832 | mutL | MW7_1832 | MW7_2688 | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | MutL protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.808 |
| MW7_1832 | mutM | MW7_1832 | MW7_0353 | Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process. | formamidopyrimidine-DNA glycosylase MutM; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.449 |
page 1 of 5