STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MW7_2947Helicase; Protein involved in nucleic acid binding. (1322 aa)    
Predicted Functional Partners:
MW7_2951
Helicase domain-containing protein; Protein involved in DNA binding and auxin biosynthetic process.
 
 
 0.993
MW7_1832
Putative ATP-dependent helicase; Protein involved in DNA binding and nucleobase, nucleoside, nucleotide and nucleic acid metabolic process.
   
 0.986
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
  0.984
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.984
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.983
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.979
MW7_2945
Phospholipase D/transphosphatidylase; Protein involved in catalytic activity and metabolic process.
 
     0.950
MW7_2946
Hypothetical protein.
 
     0.950
MW7_2950
Atp phosphoribosyltransferase; Protein involved in nucleotide binding and cellular amino acid biosynthetic process.
 
     0.949
MW7_2948
Protein involved in ATP binding.
 
 
   0.947
Your Current Organism:
Burkholderiaceae bacterium PBA
NCBI taxonomy Id: 795666
Other names: B. bacterium PBA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.