STRINGSTRING
C497_19279 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_19279" - Peptidase M20 in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_19279Peptidase M20 (411 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase (411 aa)
   
  0.965
arcB
Ornithine carbamoyltransferase (301 aa)
   
 
  0.959
C497_18367
Acetyl-lysine deacetylase (363 aa)
   
   
    0.949
C497_08664
Peptidase M20 (376 aa)
   
   
    0.927
C497_11588
Arginase (302 aa)
   
 
  0.915
C497_09008
Succinyl-diaminopimelate desuccinylase (348 aa)
   
   
 
0.842
C497_16057
Urea ABC transporter, substrate-binding protein (421 aa)
     
 
  0.686
argC
N-acetyl-gamma-glutamyl-phosphate reductase (355 aa)
   
 
  0.652
C497_16862
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein (906 aa)
   
   
  0.642
C497_13790
Hypothetical protein (451 aa)
 
   
  0.623
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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