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endA protein (Halalkalicoccus jeotgali) - STRING interaction network
"endA" - tRNA intron endonuclease in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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endAtRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5’ and 3’ splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’ cyclic phosphate and 5’-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (342 aa)    
Predicted Functional Partners:
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (430 aa)
   
 
 
  0.994
trpS
tryptophanyl-tRNA synthetase (521 aa)
         
  0.922
HacjB3_00095
Hypothetical protein (248 aa)
         
  0.789
nop10
H/ACA RNA-protein complex component Nop10p; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (60 aa)
   
   
  0.740
cca
tRNA cytidylyltransferase; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate (449 aa)
   
     
  0.730
C497_17517
Nucleic acid binding OB-fold tRNA/helicase-type (309 aa)
   
   
  0.712
C497_09953
Replication factor A (482 aa)
   
   
  0.691
C497_15383
Putative RNA-binding protein containing PIN domain-containing protein (126 aa)
 
        0.689
C497_13256
Hypothetical protein (508 aa)
   
     
  0.684
nusG
NusG antitermination factor; Stimulates transcription elongation (145 aa)
 
     
  0.668
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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