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C497_19102 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_19102" - Peptidase A24A prepilin type IV in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_19102Peptidase A24A prepilin type IV (326 aa)    
Predicted Functional Partners:
C497_18662
Signal sequence peptidase (233 aa)
 
     
  0.713
C497_19097
Hypothetical protein (262 aa)
              0.709
C497_11742
Type II secretion system protein E (769 aa)
 
     
  0.670
C497_11747
Type IV pilus biogenesis complex membrane subunit (669 aa)
 
     
  0.667
C497_13391
Hypothetical protein (77 aa)
 
          0.657
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP (122 aa)
              0.656
C497_05427
Dihydropyrimidine dehydrogenase (245 aa)
 
          0.652
C497_07414
Hypothetical protein (285 aa)
   
          0.652
C497_08079
Hypothetical protein (241 aa)
   
          0.649
C497_14392
Transcription repressor CinR (116 aa)
 
          0.648
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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