STRINGSTRING
C497_19082 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_19082" - Globin in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_19082Globin (120 aa)    
Predicted Functional Partners:
C497_19077
Phosphoglucosamine mutase (455 aa)
              0.686
C497_19072
Hypothetical protein (254 aa)
              0.521
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose- 5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP (282 aa)
              0.449
C497_11418
Mechanosensitive ion channel MscS (295 aa)
              0.446
C497_13443
Mechanosensitive ion channel MscS (385 aa)
              0.446
C497_14067
Mechanosensitive ion channel MscS (371 aa)
              0.446
C497_14887
Hypothetical protein (252 aa)
              0.446
C497_04907
Mechanosensitive ion channel MscS (292 aa)
              0.446
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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