STRINGSTRING
C497_18942 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_18942" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_18942Hypothetical protein (125 aa)    
Predicted Functional Partners:
C497_18947
Hypothetical protein (189 aa)
              0.867
C497_18937
Hypothetical protein (68 aa)
              0.656
C497_18927
Sodium-dependent phosphate transporter (397 aa)
 
          0.645
C497_18952
Hypothetical protein (41 aa)
              0.611
C497_10083
Hypothetical protein (273 aa)
   
          0.607
C497_05557
Transcriptional regulator TrmB (350 aa)
   
          0.599
C497_18892
Cobalt ABC transporter permease (232 aa)
   
          0.599
C497_13478
DNA binding domain-containing protein (164 aa)
   
          0.591
C497_12931
Major facilitator superfamily protein (408 aa)
   
          0.572
C497_11583
Peptidase M28 (436 aa)
   
          0.560
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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