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C497_18892 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_18892" - Cobalt ABC transporter permease in Halalkalicoccus jeotgali
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_18892Cobalt ABC transporter permease (232 aa)    
Predicted Functional Partners:
C497_18897
Cobalt ABC transporter ATP-binding protein (231 aa)
 
  0.999
C497_18902
BioY protein (204 aa)
       
  0.982
C497_18907
Hypothetical protein (197 aa)
              0.673
C497_18942
Hypothetical protein (125 aa)
   
          0.599
HacjB3_09670
Kinetochore-Ndc80 complex subunit Spc25 (636 aa)
 
          0.588
C497_05862
OsmC family protein (131 aa)
   
          0.586
C497_13478
DNA binding domain-containing protein (164 aa)
   
          0.585
C497_12931
Major facilitator superfamily protein (408 aa)
   
          0.584
C497_05437
Hypothetical protein (201 aa)
   
          0.576
C497_10788
Hypothetical protein (506 aa)
   
          0.564
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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