STRINGSTRING
C497_18592 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_18592" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_18592Hypothetical protein (125 aa)    
Predicted Functional Partners:
C497_18597
NADH-flavin oxidoreductase/NADH oxidase (429 aa)
              0.721
C497_18602
Hypothetical protein (159 aa)
              0.721
hel308
Ski2-like helicase; DNA-dependent ATPase and 3’-5’ DNA helicase that may be involved in repair of stalled replication forks (763 aa)
              0.690
C497_18587
Hypothetical protein (164 aa)
              0.690
C497_18607
Hypothetical protein (69 aa)
              0.536
C497_18577
Ferredoxin (80 aa)
              0.523
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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