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hel308 protein (Halalkalicoccus jeotgali) - STRING interaction network
"hel308" - Ski2-like helicase in Halalkalicoccus jeotgali
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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hel308Ski2-like helicase; DNA-dependent ATPase and 3’-5’ DNA helicase that may be involved in repair of stalled replication forks (763 aa)    
Predicted Functional Partners:
fusA
Elongation factor EF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (729 aa)
   
  0.986
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C’/D’ sRNAs (120 aa)
 
    0.985
C497_14932
Nucleolar protein-like protein (276 aa)
   
  0.980
C497_13503
snRNP-like protein (61 aa)
       
  0.978
rad50
Chromosome segregation protein; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50/Mre11 complex (890 aa)
     
 
  0.946
C497_15678
Peptidylprolyl isomerase (180 aa)
     
    0.937
C497_09733
DNA-directed RNA polymerase subunit beta’’ (522 aa)
   
 
    0.933
C497_18587
Hypothetical protein (164 aa)
              0.917
rpoP
DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (44 aa)
   
 
    0.902
HacjB3_09670
Kinetochore-Ndc80 complex subunit Spc25 (636 aa)
     
 
  0.898
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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