STRINGSTRING
argD protein (Halalkalicoccus jeotgali) - STRING interaction network
"argD" - Acetylornithine aminotransferase in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argDAcetylornithine aminotransferase (379 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase (355 aa)
 
 
  0.999
C497_18367
Acetyl-lysine deacetylase (363 aa)
 
 
  0.994
C497_18357
Acetylglutamate/acetylaminoadipate kinase (277 aa)
   
  0.994
arcB
Ornithine carbamoyltransferase (301 aa)
   
  0.982
C497_18347
30S ribosomal protein S6 modification protein (288 aa)
         
  0.939
argH
Argininosuccinate lyase (482 aa)
 
   
  0.926
argG
Argininosuccinate synthase (411 aa)
 
   
  0.876
C497_18342
Lysine biosynthesis protein LysW (61 aa)
         
  0.818
C497_11588
Arginase (302 aa)
 
 
  0.747
C497_08893
Glutamate synthase (1518 aa)
   
   
  0.700
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (9%) [HD]