STRINGSTRING
C497_17967 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_17967" - Ferredoxin in Halalkalicoccus jeotgali
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_17967Ferredoxin (105 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (352 aa)
 
 
  0.954
C497_10188
Methyl-viologen-reducing hydrogenase subunit delta (712 aa)
   
 
  0.808
C497_03825
Linocin_M18 bacteriocin protein (356 aa)
     
      0.720
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (344 aa)
   
   
  0.720
C497_08584
Thioredoxin domain-containing protein (89 aa)
   
  0.681
C497_08129
Thioredoxin (112 aa)
   
  0.681
C497_14827
Hypothetical protein (129 aa)
   
  0.681
HacjB3_07740
Glutaredoxin 2 (82 aa)
   
  0.681
C497_05892
Thiol-disulfide isomerase/thioredoxin (188 aa)
   
  0.681
C497_07804
DnaJ N-terminal domain-containing protein (220 aa)
 
   
  0.659
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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