STRINGSTRING
C497_17637 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_17637" - Hypothetical protein in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_17637Hypothetical protein (190 aa)    
Predicted Functional Partners:
C497_17632
Hypothetical protein (189 aa)
              0.783
C497_17647
Hypothetical protein (347 aa)
 
          0.662
HacjB3_01675
Group 1 glycosyl transferase (299 aa)
 
          0.661
rnp3
Ribonuclease P; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (233 aa)
   
          0.554
C497_10023
Putative transcriptional regulator (93 aa)
   
          0.544
C497_16892
Hypothetical protein (358 aa)
   
          0.538
HacjB3_07125
Polysaccharide deacetylase (330 aa)
   
          0.535
C497_17682
Hypothetical protein (337 aa)
 
          0.529
C497_16447
Polysaccharide deacetylase (355 aa)
   
          0.518
C497_17612
Polysaccharide biosynthesis protein (531 aa)
   
          0.515
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
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