STRINGSTRING
C497_17317 protein (Halalkalicoccus jeotgali) - STRING interaction network
"C497_17317" - Putative CopG/Arc/MetJ family transcriptional regulator in Halalkalicoccus jeotgali
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C497_17317Putative CopG/Arc/MetJ family transcriptional regulator (59 aa)    
Predicted Functional Partners:
C497_17312
Hypothetical protein (236 aa)
              0.898
C497_19269
Non-histone chromosomal MC1 family protein (102 aa)
   
          0.652
C497_03042
tRNA-guanine transglycosylase (582 aa)
   
          0.647
C497_17322
Hypothetical protein (245 aa)
              0.643
C497_09453
Hypothetical protein (237 aa)
   
          0.634
rpoP
DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (44 aa)
   
          0.627
mutS2
DNA mismatch repair protein MutS domain-containing protein; Has ATPase and non-specific DNA-binding activities (658 aa)
 
          0.618
C497_17517
Nucleic acid binding OB-fold tRNA/helicase-type (309 aa)
   
          0.612
C497_05157
Hypothetical protein (194 aa)
   
          0.609
aroK
Shikimate kinase (285 aa)
   
          0.589
Your Current Organism:
Halalkalicoccus jeotgali
NCBI taxonomy Id: 795797
Other names: H. jeotgali, H. jeotgali B3, Halalkalicoccus, Halalkalicoccus Xue et al. 2005, Halalkalicoccus jeotgali, Halalkalicoccus jeotgali B3, Halalkalicoccus jeotgali DSM 18796, Halalkalicoccus jeotgali JCM 14584, Halalkalicoccus jeotgali Roh et al. 2007, Halalkalicoccus jeotgali str. B3, Halalkalicoccus jeotgali strain B3
Server load: low (6%) [HD]